About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g20438MICROTUBULE-ASSOCIATED PROTEIN
Chiridota_g20439SORBITOL DEHYDROGENASE
Chiridota_g2044COILIN
Chiridota_g20440
Chiridota_g20441
Chiridota_g20442IG-LIKE DOMAIN-CONTAINING PROTEIN
Chiridota_g20443
Chiridota_g20444
Chiridota_g20445IG-LIKE DOMAIN-CONTAINING PROTEIN
Chiridota_g20446
Chiridota_g20447MYOSIN
Chiridota_g20448
Chiridota_g20449
Chiridota_g2045NAD DEPENDENT EPIMERASE/DEHYDRATASE
Chiridota_g20450
Chiridota_g20451
Chiridota_g20452
Chiridota_g20453
Chiridota_g20454MADS BOX PROTEIN
Chiridota_g20455RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Chiridota_g20456MENORIN (DENDRITIC BRANCHING PROTEIN)
Chiridota_g20457
Chiridota_g20458ADHESION G-PROTEIN COUPLED RECEPTOR V1
Chiridota_g20459
Chiridota_g2046
Chiridota_g20460
Chiridota_g20461
Chiridota_g20462TNFR-CYS DOMAIN-CONTAINING PROTEIN
Chiridota_g20463
Chiridota_g20464TNFR-CYS DOMAIN-CONTAINING PROTEIN
Chiridota_g20465DEHYDROGENASES, SHORT CHAIN
Chiridota_g20466PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Chiridota_g20467
Chiridota_g20468ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g20469
Chiridota_g2047SERINE/ARGININE RICH SPLICING FACTOR
Chiridota_g20470PROTEIN DISULFIDE ISOMERASE
Chiridota_g20471
Chiridota_g20472
Chiridota_g20473
Chiridota_g20474
Chiridota_g20475
Chiridota_g20476RGM DOMAIN FAMILY MEMBER DRAG-1
Chiridota_g20477GLUCOSYLCERAMIDASE
Chiridota_g20478
Chiridota_g20479GLUTAREDOXIN-1
Chiridota_g2048
Chiridota_g20480ARM REPEAT SUPERFAMILY PROTEIN
Chiridota_g20481REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g20482
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