About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-684Mbscaffold2019--PRJNA47284691.70%25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka01101CADHERIN-23
Tanaka01102CADHERIN-23
Tanaka01103DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
Tanaka01104
Tanaka01105SCD6 PROTEIN-RELATED
Tanaka01106TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4
Tanaka01107CADHERIN-23
Tanaka01108POTASSIUM CHANNEL, SUBFAMILY K
Tanaka01109OPIOID GROWTH FACTOR RECEPTOR OGFR ZETA-TYPE OPIOID RECEPTOR
Tanaka01110COLLAGEN ALPHA
Tanaka01111TRANSCRIPTION FACTOR-LIKE 5 PROTEIN
Tanaka01112TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN
Tanaka01113PROTEIN KINASE C-BINDING PROTEIN 1
Tanaka01114TRANSLOCATION ASSOCIATED MEMBRANE PROTEIN
Tanaka01115NUCLEAR RECEPTOR COACTIVATOR
Tanaka01116GEO13361P1-RELATED
Tanaka01117AQUAPORIN TRANSPORTER
Tanaka01118AQUAPORIN TRANSPORTER
Tanaka01119TRANSCRIPTION INTERMEDIARY FACTOR
Tanaka01120TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE
Tanaka01121NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED
Tanaka01122
Tanaka01123DNA PRIMASE SMALL SUBUNIT
Tanaka01124RHO FAMILY GTPASE
Tanaka01125ATP-DEPENDENT RNA HELICASE DBP3
Tanaka01126VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT
Tanaka01127GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD
Tanaka01128GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Tanaka01129MYOSIN HEAVY CHAIN, NON-MUSCLE
Tanaka01130AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Tanaka01131E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
Tanaka01132GLUTAMINASE
Tanaka01133ALADIN/ADRACALIN/AAAS
Tanaka01134SERINE-THREONINE PROTEIN KINASE
Tanaka01135KH DOMAIN CONTAINING RNA BINDING PROTEIN
Tanaka01136DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
Tanaka011376-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
Tanaka01138COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Tanaka01139SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Tanaka01140SPECIFICALLY ANDROGEN-REGULATED GENE PROTEIN
Tanaka01141ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Tanaka01142TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED
Tanaka01143UNCHARACTERIZED
Tanaka01144OVARIAN CARCINOMA ANTIGEN CA125-RELATED
Tanaka01145ETS
Tanaka01146PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
Tanaka01147SMALL INTEGRAL MEMBRANE PROTEIN 29
Tanaka01148HIGH MOBILITY GROUP PROTEINS HMG-A AND C
Tanaka01149METABOTROPIC GLUTAMATE RECEPTOR
Tanaka01150TITIN
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