About Pseudoliparis swirei

Pseudoliparis swirei is a species of snailfish in the family Liparidae, discovered in the hadal zone of the Mariana Trench at depths exceeding 7,000 meters. This species is adapted to extreme deep-sea environments, thriving under immense pressure and near-freezing temperatures. Pseudoliparis swirei is characterized by its gelatinous body and reduced skeletal structure, which help it withstand the crushing pressures of the deep ocean. Its discovery provides valuable insights into the adaptations of vertebrates to one of the most extreme habitats on Earth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordataMariana hadal snailfish (MHS)Deep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-684Mbscaffold2019--PRJNA47284691.70%25,262

References
TitleJournalPubmed ID
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptationNature Ecology & Evolution30988486

Gene Information

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Gene IDDescription
Tanaka00801HISTONE H2A
Tanaka00802RNA-BINDING MOTIF PROTEIN, X-LINKED 2
Tanaka00803HOMEOBOX PROTEIN CDX
Tanaka00804TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR
Tanaka00805ARRESTIN
Tanaka00806
Tanaka00807AP COMPLEX SUBUNIT MU
Tanaka00808E3 UBIQUITIN-PROTEIN LIGASE SIAH2
Tanaka00809NEUROTRANSMITTER GATED ION CHANNEL
Tanaka00810G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Tanaka00811G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Tanaka00812G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Tanaka00813ORGANIC ANION TRANSPORTER
Tanaka00814SERINE PROTEASE INHIBITOR, SERPIN
Tanaka00815SERINE PROTEASE INHIBITOR, SERPIN
Tanaka00816SOLUTE CARRIER FAMILY 13 MEMBER
Tanaka00817MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31
Tanaka00818DIMETHYLANILINE MONOOXYGENASE
Tanaka00819SCHWANNOMIN INTERACTING PROTEIN 1
Tanaka00820
Tanaka00821CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
Tanaka00822RIBONUCLEASE KAPPA
Tanaka00823G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Tanaka00824NUCLEOPORIN
Tanaka00825G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Tanaka00826MICROTUBULE-ASSOCIATED PROTEIN 11
Tanaka00827HISTONE H2A
Tanaka00828HISTONE H3
Tanaka00829LIPOXYGENASE
Tanaka00830RAP GTPASE-ACTIVATING PROTEIN
Tanaka00831NUCLEAR CAP-BINDING PROTEIN SUBUNIT 3
Tanaka00832UNCHARACTERIZED
Tanaka00833DOLICHYL GLYCOSYLTRANSFERASE
Tanaka00834CALCIUM BINDING PROTEINS
Tanaka00835
Tanaka00836STROMAL INTERACTION MOLECULE HOMOLOG
Tanaka00837SOLUTE CARRIER FAMILY 22 MEMBER
Tanaka00838INWARD RECTIFIER POTASSIUM CHANNEL
Tanaka00839SARCOSINE DEHYDROGENASE-RELATED
Tanaka00840FCH AND DOUBLE SH3 DOMAINS PROTEIN
Tanaka00841REMODELING AND SPACING FACTOR 1
Tanaka00842AQUAPORIN
Tanaka00843VACUOLAR PROTEIN SORTING 26 RELATED
Tanaka00844INWARD RECTIFIER POTASSIUM CHANNEL
Tanaka00845PDZ AND LIM DOMAIN PROTEIN ZASP
Tanaka00846PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Tanaka00847POU DOMAIN
Tanaka00848E3 UBIQUITIN-PROTEIN LIGASE TRIM37
Tanaka00849PROTEIN PHOSPHATASE
Tanaka00850-
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