Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00114010 | CLAUDIN |
| SKAU_T00114020 | CLAUDIN |
| SKAU_T00114030 | POLYMERIC-IMMUNOGLOBULIN RECEPTOR |
| SKAU_T00114040 | CHITINASE |
| SKAU_T00114050 | CHITINASE |
| SKAU_T00114060 | RAD51/NUKS-INTERACTING PROTEIN |
| SKAU_T00114070 | ETS |
| SKAU_T00114080 | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA |
| SKAU_T00114090 | SYNAPTOBREVIN FAMILY MEMBER |
| SKAU_T00114100 | PERIOD CIRCADIAN PROTEIN |
| SKAU_T00114110 | UROTENSIN 2 |
| SKAU_T00114120 | C3ORF6 PROTEIN-RELATED |
| SKAU_T00114130 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 9 |
| SKAU_T00114140 | SEGMENT POLARITY PROTEIN DISHEVELLED |
| SKAU_T00114150 | SEGMENT POLARITY PROTEIN DISHEVELLED |
| SKAU_T00114160 | MATRIX REMODELING-ASSOCIATED PROTEIN 8 |
| SKAU_T00114170 | MATRIX REMODELING-ASSOCIATED PROTEIN 8 |
| SKAU_T00114180 | AURORA KINASE A-INTERACTING PROTEIN |
| SKAU_T00114190 | RAP GTPASE-ACTIVATING PROTEIN |
| SKAU_T00114200 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| SKAU_T00114210 | |
| SKAU_T00114220 | |
| SKAU_T00114230 | |
| SKAU_T00114240 | |
| SKAU_T00114250 | |
| SKAU_T00114260 | |
| SKAU_T00114270 | |
| SKAU_T00114280 | CLASP |
| SKAU_T00114290 | TRANSMEMBRANE PROTEIN 189 |
| SKAU_T00114300 | |
| SKAU_T00114310 | |
| SKAU_T00114320 | |
| SKAU_T00114330 | CEREBELLIN-RELATED |
| SKAU_T00114340 | |
| SKAU_T00114350 | |
| SKAU_T00114360 | |
| SKAU_T00114370 | |
| SKAU_T00114380 | |
| SKAU_T00114390 | |
| SKAU_T00114400 | REVERSE TRANSCRIPTASES |
| SKAU_T00114410 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00114420 | |
| SKAU_T00114430 | |
| SKAU_T00114440 | |
| SKAU_T00114450 | N4BP1-RELATED |
| SKAU_T00114460 | E3 UBIQUITIN-PROTEIN LIGASE SIAH2 |
| SKAU_T00114470 | ATP DEPENDENT LON PROTEASE FAMILY MEMBER |
| SKAU_T00114480 | INTERLEUKIN-34 |
| SKAU_T00114490 | |
| SKAU_T00114500 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
