The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g19629 | ZINC/IRON TRANSPORTER |
| MBSQW58_g1963 | TOLL-LIKE RECEPTOR |
| MBSQW58_g19630 | THREONINE-TRNA LIGASE |
| MBSQW58_g19631 | |
| MBSQW58_g19632 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| MBSQW58_g19633 | ANKYRIN REPEAT-CONTAINING |
| MBSQW58_g19634 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| MBSQW58_g19635 | |
| MBSQW58_g19636 | |
| MBSQW58_g19637 | |
| MBSQW58_g19638 | |
| MBSQW58_g19639 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| MBSQW58_g1964 | TOLL-LIKE RECEPTOR |
| MBSQW58_g19640 | ATP-DEPENDENT RNA HELICASE |
| MBSQW58_g19641 | UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER |
| MBSQW58_g19642 | PYGOPUS |
| MBSQW58_g19643 | TUBULIN POLYGLUTAMYLASE |
| MBSQW58_g19644 | |
| MBSQW58_g19645 | |
| MBSQW58_g19646 | |
| MBSQW58_g19647 | |
| MBSQW58_g19648 | |
| MBSQW58_g19649 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g1965 | TOLL-LIKE RECEPTOR |
| MBSQW58_g19650 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| MBSQW58_g19651 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| MBSQW58_g19652 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45 |
| MBSQW58_g19653 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45 |
| MBSQW58_g19654 | |
| MBSQW58_g19655 | GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45 |
| MBSQW58_g19656 | HISTONE ACETYLTRANSFERASE-RELATED |
| MBSQW58_g19657 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| MBSQW58_g19658 | 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER |
| MBSQW58_g19659 | |
| MBSQW58_g1966 | |
| MBSQW58_g19660 | METHYLTRANSFERASE, FKBM FAMILY PROTEIN |
| MBSQW58_g19661 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
| MBSQW58_g19662 | HISTONE ACETYLTRANSFERASE COMPLEX |
| MBSQW58_g19663 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
| MBSQW58_g19664 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| MBSQW58_g19665 | |
| MBSQW58_g19666 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| MBSQW58_g19667 | |
| MBSQW58_g19668 | |
| MBSQW58_g19669 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| MBSQW58_g1967 | |
| MBSQW58_g19670 | CALCIUM BINDING PROTEINS |
| MBSQW58_g19671 | |
| MBSQW58_g19672 | |
| MBSQW58_g19673 |
