About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2923.12668ACROSIN-RELATED
mRNA.BJAM.scaffold2923.12669ACYL-COA SYNTHETASE
mRNA.BJAM.scaffold2923.12670
mRNA.BJAM.scaffold2923.12671ACYL-COA SYNTHETASE
mRNA.BJAM.scaffold2923.12672DNA LIGASE 1/3 FAMILY MEMBER
mRNA.BJAM.scaffold2923.12673DNA LIGASE 1/3 FAMILY MEMBER
mRNA.BJAM.scaffold2923.12674ZGC:174356
mRNA.BJAM.scaffold2925.12675SH3 DOMAIN-CONTAINING
mRNA.BJAM.scaffold2925.12676
mRNA.BJAM.scaffold2925.12677BREAST CARCINOMA AMPLIFIED SEQUENCE 3
mRNA.BJAM.scaffold2926.12678DNA LIGASE
mRNA.BJAM.scaffold2926.12679ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER
mRNA.BJAM.scaffold2926.12680TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11
mRNA.BJAM.scaffold2926.12681CADHERIN-87A
mRNA.BJAM.scaffold2926.12682CADHERIN-23
mRNA.BJAM.scaffold2926.12683
mRNA.BJAM.scaffold2926.12684CADHERIN-23
mRNA.BJAM.scaffold2926.12685CADHERIN-23
mRNA.BJAM.scaffold2927.12686
mRNA.BJAM.scaffold2927.12687
mRNA.BJAM.scaffold2927.12688LIM DOMAIN ONLY 7
mRNA.BJAM.scaffold2927.12689FLAVIN MONOAMINE OXIDASE
mRNA.BJAM.scaffold2927.12690FLAVIN MONOAMINE OXIDASE
mRNA.BJAM.scaffold2927.12691FLAVIN MONOAMINE OXIDASE
mRNA.BJAM.scaffold2927.12692GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED
mRNA.BJAM.scaffold2927.12693GLUTATHIONE S TRANSFERASE D10, ISOFORM A-RELATED
mRNA.BJAM.scaffold2928.12694SCAVENGER RECEPTOR CLASS F
mRNA.BJAM.scaffold2928.12695UNCHARACTERIZED
mRNA.BJAM.scaffold2928.12696ANOCTAMIN
mRNA.BJAM.scaffold2928.12697
mRNA.BJAM.scaffold2928.12698ANOCTAMIN
mRNA.BJAM.scaffold2928.12699ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32
mRNA.BJAM.scaffold2928.12700CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold2928.12701
mRNA.BJAM.scaffold2928.12702
mRNA.BJAM.scaffold2929.12703
mRNA.BJAM.scaffold293.2205TUBULIN
mRNA.BJAM.scaffold2930.12704
mRNA.BJAM.scaffold2930.12705
mRNA.BJAM.scaffold2930.12706BEAT PROTEIN
mRNA.BJAM.scaffold2930.12707U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10
mRNA.BJAM.scaffold2930.1270850S RIBOSOMAL PROTEIN L4
mRNA.BJAM.scaffold2930.12709
mRNA.BJAM.scaffold2931.12710CADHERIN-23
mRNA.BJAM.scaffold2931.12711CENTROSOMAL PROTEIN OF 41 KDA
mRNA.BJAM.scaffold2932.12712DEPHOSPHO-COA KINASE-RELATED
mRNA.BJAM.scaffold2934.12713
mRNA.BJAM.scaffold2934.12714
mRNA.BJAM.scaffold2934.12715
mRNA.BJAM.scaffold2936.12716
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