About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2872.12520
mRNA.BJAM.scaffold2873.12521
mRNA.BJAM.scaffold2873.12522
mRNA.BJAM.scaffold2873.12523
mRNA.BJAM.scaffold2873.12524EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
mRNA.BJAM.scaffold2874.12525PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
mRNA.BJAM.scaffold2875.12526PROTEIN ZWILCH HOMOLOG
mRNA.BJAM.scaffold2875.12527PLASMINOGEN RECEPTOR (KT)
mRNA.BJAM.scaffold2875.12528MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
mRNA.BJAM.scaffold2875.12529MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1
mRNA.BJAM.scaffold2876.12530CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold2876.12531
mRNA.BJAM.scaffold2876.12532PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.scaffold2876.12533
mRNA.BJAM.scaffold2876.12534GOLGI SNARE BET1-RELATED
mRNA.BJAM.scaffold2876.12535PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
mRNA.BJAM.scaffold2876.12536LD34147P
mRNA.BJAM.scaffold2876.12538
mRNA.BJAM.scaffold2876.12539METALLOPROTEASE
mRNA.BJAM.scaffold2877.12540
mRNA.BJAM.scaffold2878.12541TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold2879.12542LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
mRNA.BJAM.scaffold2879.12543TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
mRNA.BJAM.scaffold2879.12544PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
mRNA.BJAM.scaffold2879.12545MITOCHONDRIAL RIBOSOMAL PROTEIN L30
mRNA.BJAM.scaffold288.2184
mRNA.BJAM.scaffold288.2185
mRNA.BJAM.scaffold288.2186
mRNA.BJAM.scaffold2880.12546CENTROMERE PROTEIN L
mRNA.BJAM.scaffold2881.12547CYTOKINE RECEPTOR
mRNA.BJAM.scaffold2881.12548TITIN
mRNA.BJAM.scaffold2881.12549BASIGIN RELATED
mRNA.BJAM.scaffold2881.12550CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold2882.12551
mRNA.BJAM.scaffold2882.12552
mRNA.BJAM.scaffold2882.12553
mRNA.BJAM.scaffold2884.12554
mRNA.BJAM.scaffold2884.12555STAR-RELATED LIPID TRANSFER PROTEIN 9
mRNA.BJAM.scaffold2884.12556
mRNA.BJAM.scaffold2884.12557STAR-RELATED LIPID TRANSFER PROTEIN 9
mRNA.BJAM.scaffold2884.12558TRANSPORTIN 3 AND IMPORTIN 13
mRNA.BJAM.scaffold2884.12559TETRASPANIN
mRNA.BJAM.scaffold2884.12560HEME-BINDING MONOOXYGENASE FAMILY
mRNA.BJAM.scaffold2884.12561CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold2884.12562CYTOCHROME P450 508A4-RELATED
mRNA.BJAM.scaffold2884.12563
mRNA.BJAM.scaffold2884.12564PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35
mRNA.BJAM.scaffold2884.12565VEPH-A/MELTED
mRNA.BJAM.scaffold2884.12566VEPH-A/MELTED
mRNA.BJAM.scaffold2884.12567VEPH-A/MELTED
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