Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00101010 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| SKAU_T00101020 | RAC GTPASE-ACTIVATING PROTEIN 1 |
| SKAU_T00101030 | |
| SKAU_T00101040 | 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE |
| SKAU_T00101050 | AMPHIPHYSIN |
| SKAU_T00101060 | |
| SKAU_T00101070 | DAZ-ASSOCIATED PROTEIN 2 |
| SKAU_T00101080 | POU DOMAIN |
| SKAU_T00101090 | TRANSCRIPTION FACTOR CP2 |
| SKAU_T00101100 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00101110 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| SKAU_T00101120 | |
| SKAU_T00101130 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00101140 | SI:CH211-243P7.3-RELATED |
| SKAU_T00101150 | |
| SKAU_T00101160 | INTEGRIN ALPHA |
| SKAU_T00101170 | SUSHI DOMAIN-CONTAINING PROTEIN |
| SKAU_T00101180 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00101190 | HEME TRANSPORTER HRG1 |
| SKAU_T00101200 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00101210 | |
| SKAU_T00101220 | HISTONE DEACETYLASE 9-RELATED |
| SKAU_T00101230 | |
| SKAU_T00101240 | |
| SKAU_T00101250 | |
| SKAU_T00101260 | |
| SKAU_T00101270 | |
| SKAU_T00101280 | |
| SKAU_T00101290 | |
| SKAU_T00101300 | |
| SKAU_T00101310 | NUCLEAR HORMONE RECEPTOR |
| SKAU_T00101320 | THIAMIN PYROPHOSPHOKINASE |
| SKAU_T00101330 | |
| SKAU_T00101340 | TRANSKETOLASE |
| SKAU_T00101350 | EXTRACELLULAR MATRIX PROTEIN 2-RELATED |
| SKAU_T00101360 | AGAP008170-PA |
| SKAU_T00101370 | BETA-1,4-GALACTOSYLTRANSFERASE |
| SKAU_T00101380 | HRAS-LIKE SUPPRESSOR - RELATED |
| SKAU_T00101390 | HRAS-LIKE SUPPRESSOR - RELATED |
| SKAU_T00101400 | DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00101410 | EG:EG0003.4 PROTEIN-RELATED |
| SKAU_T00101420 | SRCR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00101430 | |
| SKAU_T00101440 | CATION TRANSPORTING ATPASE |
| SKAU_T00101450 | |
| SKAU_T00101460 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00101470 | SRCR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00101480 | SRCR DOMAIN-CONTAINING PROTEIN |
| SKAU_T00101490 | LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN |
| SKAU_T00101500 | JITTERBUG, ISOFORM N |
