The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
Title | Journal | Pubmed ID |
---|---|---|
De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
Gene ID | Description |
---|---|
MBSQW58_g18684 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
MBSQW58_g18685 | |
MBSQW58_g18686 | ANKYRIN REPEAT FAMILY PROTEIN |
MBSQW58_g18687 | CYTOCHROME P450 FAMILY 4 |
MBSQW58_g18688 | CYTOCHROME P450 FAMILY 4 |
MBSQW58_g18689 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
MBSQW58_g1869 | FOS TRANSCRIPTION FACTOR-RELATED |
MBSQW58_g18690 | NEUROTRANSMITTER GATED ION CHANNEL |
MBSQW58_g18691 | RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 |
MBSQW58_g18692 | DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2 |
MBSQW58_g18693 | CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED |
MBSQW58_g18694 | |
MBSQW58_g18695 | FASCIN |
MBSQW58_g18696 | |
MBSQW58_g18697 | RNA DEMETHYLASE ALKBH5 |
MBSQW58_g18698 | F-BOX ONLY PROTEIN 7 |
MBSQW58_g18699 | TNF RECEPTOR ASSOCIATED FACTOR |
MBSQW58_g187 | CONTACTIN 5 |
MBSQW58_g1870 | ARPIN |
MBSQW58_g18700 | 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE |
MBSQW58_g18701 | 26S PROTESOME SUBUNIT 6 |
MBSQW58_g18702 | VACUOLAR PROTON ATPASES |
MBSQW58_g18703 | PORCUPINE |
MBSQW58_g18704 | FACTOR VIII-ASSOCIATED GENE 1 |
MBSQW58_g18705 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
MBSQW58_g18706 | DRAB11-RELATED |
MBSQW58_g18707 | 2-5A-DEPENDENT RIBONUCLEASE |
MBSQW58_g18708 | IRE1-RELATED |
MBSQW58_g18709 | UBIQUITIN-ACTIVATING ENZYME E1 |
MBSQW58_g1871 | URIDINE PHOSPHORYLASE |
MBSQW58_g18710 | TEX2 PROTEIN-RELATED |
MBSQW58_g18711 | TRINUCLEOTIDE REPEAT-CONTAINING GENE 6 |
MBSQW58_g18712 | |
MBSQW58_g18713 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
MBSQW58_g18714 | - |
MBSQW58_g18715 | UNCHARACTERIZED |
MBSQW58_g18716 | PROTEIN DISULFIDE ISOMERASE |
MBSQW58_g18717 | |
MBSQW58_g18718 | PRA1 PROTEIN |
MBSQW58_g18719 | |
MBSQW58_g1872 | |
MBSQW58_g18720 | SODIUM/CALCIUM EXCHANGER |
MBSQW58_g18721 | SODIUM/CALCIUM EXCHANGER |
MBSQW58_g18722 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
MBSQW58_g18723 | |
MBSQW58_g18724 | |
MBSQW58_g18725 | TRANSPOSON |
MBSQW58_g18726 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
MBSQW58_g18727 | TRYPSIN-RELATED |
MBSQW58_g18728 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |