The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032877271.1 | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE |
| XP_032877272.1 | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE |
| XP_032877273.1 | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE |
| XP_032877274.1 | IFT140/172-RELATED |
| XP_032877275.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| XP_032877276.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| XP_032877277.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| XP_032877278.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 29 |
| XP_032877279.1 | HOOK PROTEINS |
| XP_032877280.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| XP_032877281.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG |
| XP_032877282.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG |
| XP_032877283.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG |
| XP_032877284.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| XP_032877285.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| XP_032877286.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| XP_032877287.1 | HOOK PROTEINS |
| XP_032877288.1 | PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 |
| XP_032877289.1 | CORTICOLIBERIN/UROCORTIN |
| XP_032877290.1 | URIDINE KINASE |
| XP_032877291.1 | URIDINE KINASE |
| XP_032877292.1 | URIDINE KINASE |
| XP_032877293.1 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| XP_032877294.1 | HOOK PROTEINS |
| XP_032877295.1 | RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNIT |
| XP_032877296.1 | ZINC FINGER PROTEIN-RELATED |
| XP_032877297.1 | ZINC FINGER PROTEIN-RELATED |
| XP_032877298.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032877299.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032877300.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032877301.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10 |
| XP_032877302.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10 |
| XP_032877303.1 | TRIFUNCTIONAL ENZYME SUBUNIT ALPHA |
| XP_032877304.1 | ACETYL-COA C-ACYLTRANSFERASE |
| XP_032877305.1 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| XP_032877306.1 | JUN TRANSCRIPTION FACTOR-RELATED |
| XP_032877307.1 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| XP_032877308.1 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| XP_032877309.1 | LD44762P |
| XP_032877310.1 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| XP_032877311.1 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| XP_032877312.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877313.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877314.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877315.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877316.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877317.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877318.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877319.1 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| XP_032877320.1 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED |
