The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032877221.1 | CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED |
| XP_032877222.1 | CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED |
| XP_032877223.1 | RUNT RELATED |
| XP_032877224.1 | RUNT RELATED |
| XP_032877225.1 | NEURONAL VESICLE TRAFFICKING-ASSOCIATED PROTEIN 2-RELATED |
| XP_032877226.1 | TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED |
| XP_032877227.1 | TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED |
| XP_032877228.1 | 60S RIBOSOMAL PROTEIN L36A/L44 |
| XP_032877229.1 | CELL DIVISION CYCLE 5-LIKE PROTEIN |
| XP_032877230.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| XP_032877231.1 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| XP_032877232.1 | DOWNSTREAM NEIGHBOR OF SON |
| XP_032877233.1 | DOWNSTREAM NEIGHBOR OF SON |
| XP_032877234.1 | AMMONIUM TRANSPORTER |
| XP_032877235.1 | MACOILIN |
| XP_032877236.1 | PHOSPHATIDYLINOSITOL GLYCAN-RELATED |
| XP_032877237.1 | MACOILIN |
| XP_032877238.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032877239.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032877240.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032877241.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032877242.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| XP_032877243.1 | FIBRONECTIN TYPE III DOMAIN-CONTAINING PROTEIN |
| XP_032877244.1 | FIBRONECTIN TYPE III DOMAIN-CONTAINING PROTEIN |
| XP_032877245.1 | PHOSPHATIDYLINOSITOL GLYCAN-RELATED |
| XP_032877246.1 | GLUCOKINASE REGULATORY PROTEIN |
| XP_032877247.1 | GLUCOKINASE REGULATORY PROTEIN |
| XP_032877248.1 | GLUCOKINASE REGULATORY PROTEIN |
| XP_032877249.1 | TYROSINE-PROTEIN KINASE |
| XP_032877250.1 | TYROSINE-PROTEIN KINASE |
| XP_032877251.1 | TYROSINE-PROTEIN KINASE |
| XP_032877252.1 | DNA-3-METHYLADENINE GLYCOSYLASE |
| XP_032877253.1 | PROTEIN FAM167A |
| XP_032877254.1 | PHOSPHATIDYLINOSITOL GLYCAN-RELATED |
| XP_032877255.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| XP_032877256.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| XP_032877257.1 | XK-RELATED PROTEIN |
| XP_032877258.1 | RGM DOMAIN FAMILY MEMBER DRAG-1 |
| XP_032877259.1 | RGM DOMAIN FAMILY MEMBER DRAG-1 |
| XP_032877260.1 | RGM DOMAIN FAMILY MEMBER DRAG-1 |
| XP_032877261.1 | MYOTUBULARIN-RELATED |
| XP_032877262.1 | L-THREONINE 3-DEHYDROGENASE |
| XP_032877263.1 | G PATCH DOMAIN CONTAINING PROTEIN |
| XP_032877264.1 | SOX TRANSCRIPTION FACTOR |
| XP_032877265.1 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| XP_032877266.1 | SOX TRANSCRIPTION FACTOR |
| XP_032877267.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 189 |
| XP_032877268.1 | RETINITIS PIGMENTOSA 1 PROTEIN |
| XP_032877269.1 | RETINITIS PIGMENTOSA 1 PROTEIN |
| XP_032877270.1 | MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE |
