The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g18279 | |
| MBSQW58_g1828 | |
| MBSQW58_g18280 | RAN BINDING PROTEIN 9-RELATED |
| MBSQW58_g18281 | FI04035P |
| MBSQW58_g18282 | AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR |
| MBSQW58_g18283 | |
| MBSQW58_g18284 | RETROTRANSPOSON GAG-LIKE PROTEIN 9 |
| MBSQW58_g18285 | BETA TRANSDUCIN-RELATED PROTEIN |
| MBSQW58_g18286 | |
| MBSQW58_g18287 | BETA TRANSDUCIN-RELATED PROTEIN |
| MBSQW58_g18288 | STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 |
| MBSQW58_g18289 | |
| MBSQW58_g1829 | |
| MBSQW58_g18290 | FATTY ACID BINDING PROTEIN |
| MBSQW58_g18291 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| MBSQW58_g18292 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| MBSQW58_g18293 | TTC17 PROTEIN |
| MBSQW58_g18294 | |
| MBSQW58_g18295 | TRANSPOSON |
| MBSQW58_g18296 | TTC17 PROTEIN |
| MBSQW58_g18297 | LEUCINE-RICH REPEAT-CONTAINING |
| MBSQW58_g18298 | LIPASE MATURATION FACTOR |
| MBSQW58_g18299 | CONDENSIN-2 COMPLEX SUBUNIT H2 |
| MBSQW58_g183 | |
| MBSQW58_g1830 | CCAAT-BINDING FACTOR-RELATED |
| MBSQW58_g18300 | GH11727P |
| MBSQW58_g18301 | 60S RIBOSOMAL PROTEIN L12 |
| MBSQW58_g18302 | PROKARYOTIC DNA TOPOISOMERASE |
| MBSQW58_g18303 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| MBSQW58_g18304 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| MBSQW58_g18305 | L-GULONOLACTONE OXIDASE |
| MBSQW58_g18306 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
| MBSQW58_g18307 | PRE-MRNA SPLICING FACTOR PRP8 |
| MBSQW58_g18308 | G-PROTEIN COUPLED RECEPTOR 143 |
| MBSQW58_g18309 | STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 |
| MBSQW58_g1831 | GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE |
| MBSQW58_g18310 | |
| MBSQW58_g18311 | |
| MBSQW58_g18312 | COLLAGEN ALPHA |
| MBSQW58_g18313 | CARBONIC ANHYDRASE |
| MBSQW58_g18314 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g18315 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2 |
| MBSQW58_g18316 | TUBULIN |
| MBSQW58_g18317 | ACETYL-COA C-ACETYLTRANSFERASE |
| MBSQW58_g18318 | MATRIX METALLOPROTEINASE |
| MBSQW58_g18319 | MATRIX METALLOPROTEINASE |
| MBSQW58_g1832 | GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE |
| MBSQW58_g18320 | HELICASE SRCAP-RELATED |
| MBSQW58_g18321 | NUCLEOLAR COMPLEX PROTEIN 4 |
| MBSQW58_g18322 | WD-40 REPEAT PROTEIN |
