About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf2191_0.1
PE_Scaf2191_0.7
PE_Scaf2191_0.8
PE_Scaf2192_0.0
PE_Scaf2192_1.7GEM-ASSOCIATED PROTEIN 6
PE_Scaf2192_1.8ESOPHAGEAL CANCER ASSOCIATED PROTEIN
PE_Scaf2192_15.6-
PE_Scaf2192_15.7
PE_Scaf2192_15.9
PE_Scaf2192_16.4MONOCARBOXYLATE TRANSPORTER
PE_Scaf2192_16.5-
PE_Scaf2192_17.4-
PE_Scaf2192_17.5METHIONINE SULFOXIDE REDUCTASE
PE_Scaf2192_18.0
PE_Scaf2192_18.4WD REPEAT DOMAIN 44
PE_Scaf2192_18.5LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
PE_Scaf2192_2.7PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN
PE_Scaf2192_20.0-
PE_Scaf2192_20.3
PE_Scaf2192_21.4GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
PE_Scaf2192_22.10PURPLE ACID PHOSPHATASE
PE_Scaf2192_22.11GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
PE_Scaf2192_22.12PURPLE ACID PHOSPHATASE
PE_Scaf2192_4.3CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
PE_Scaf2192_5.1
PE_Scaf2192_7.0
PE_Scaf2192_7.1
PE_Scaf2192_7.2
PE_Scaf2192_7.3
PE_Scaf2192_7.4
PE_Scaf2192_7.5
PE_Scaf2195_0.0
PE_Scaf2196_1.3SERINE/THREONINE PROTEIN PHOSPHATASE
PE_Scaf2196_2.7SPERM-ASSOCIATED ANTIGEN 5
PE_Scaf2196_2.9MOLTING PROTEIN MLT-4
PE_Scaf2196_3.5N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED
PE_Scaf2196_3.6WD-40 REPEAT PROTEIN
PE_Scaf2196_5.4LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
PE_Scaf2196_5.5
PE_Scaf2196_6.16UNCHARACTERIZED
PE_Scaf2196_6.8PROTEIN LIN1
PE_Scaf2196_6.9UNCHARACTERIZED
PE_Scaf2196_7.6CLATHRIN HEAVY CHAIN RELATED
PE_Scaf2196_7.7
PE_Scaf2199_0.0
PE_Scaf219_0.2CHITIN SYNTHASE
PE_Scaf2200_0.6CRUMBS FAMILY MEMBER
PE_Scaf2200_0.7OS10G0105400 PROTEIN
PE_Scaf2201_0.1
PE_Scaf2201_0.4SORTING NEXIN
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