About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 1334 1335 1336 1337 1338 1339 1340 1341 1342 1343 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_028844-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_028845-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_028846-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
OS493_028847-T1BARDET-BIEDL SYNDROME 12 PROTEIN
OS493_028848-T1-
OS493_028849-T1BARDET-BIEDL SYNDROME 12 PROTEIN
OS493_028850-T1-
OS493_028851-T1-
OS493_028852-T160 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL
OS493_028853-T110 KDA HEAT SHOCK PROTEIN
OS493_028854-T1CITRATE SYNTHASE
OS493_028855-T1AMINO ACID TRANSPORTER
OS493_028857-T1AMINO ACID TRANSPORTER
OS493_028858-T1OPSIN
OS493_028859-T1CYTOCHROME P450 20A1
OS493_028860-T1CYTOCHROME P450 20A1
OS493_028861-T1-
OS493_028862-T1CYTOCHROME P450 20A1
OS493_028863-T1-
OS493_028865-T1NEUROTRANSMITTER GATED ION CHANNEL
TOP