About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)

Original Name

Lamellibrachia satsuma Miura, 1997

Key Reference Paper

1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)

Distribution

The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50 8,074/6,60040.2-27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s108.g0026.t1TRANSMEMBRANE PROTEIN 72
Lsat_s108.g0027.t1CARBON CATABOLITE REPRESSOR PROTEIN 4
Lsat_s108.g0028.t1-
Lsat_s108.g0029.t154S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL
Lsat_s108.g0030.t1GLUTAMATE DEHYDROGENASE
Lsat_s108.g0031.t1TETRASPANIN
Lsat_s108.g0032.t1GEO09659P1
Lsat_s108.g0033.t1CELL DIVISION PROTEIN KINASE
Lsat_s108.g0034.t1CYTOCHROME B-245 CHAPERONE 1
Lsat_s108.g0035.t1REGULATORY-ASSOCIATED PROTEIN OF MTOR
Lsat_s108.g0036.t1SUPPRESSOR OF FUSED
Lsat_s108.g0037.t1RIBOSOMAL RNA METHYLTRANSFERASE
Lsat_s108.g0038.t1FLAVIN REDUCTASE
Lsat_s108.g0039.t130S 40S RIBOSOMAL PROTEIN
Lsat_s108.g0040.t1CHROMOSOME TRANSMISSION FIDELITY FACTOR 18
Lsat_s108.g0041.t1-
Lsat_s108.g0042.t1-
Lsat_s108.g0043.t1-
Lsat_s108.g0044.t1CENTROSOMAL PROTEIN 2
Lsat_s108.g0045.t1CMF/LEK/CENP CELL DIVISION-RELATED
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