Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)
Lamellibrachia satsuma Miura, 1997
1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)
The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50 | 8,074/6,600 | 40.2 | - | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s090.g0061.t1 | UBIQUITIN-ACTIVATING ENZYME E1 |
Lsat_s090.g0062.t1 | MATING RESPONSE PROTEIN POI2 |
Lsat_s090.g0063.t1 | UBIQUITIN-ACTIVATING ENZYME E1 |
Lsat_s090.g0064.t1 | SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN |
Lsat_s090.g0065.t1 | REMODELING AND SPACING FACTOR 1 |
Lsat_s090.g0066.t1 | - |
Lsat_s090.g0067.t1 | - |
Lsat_s090.g0068.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s090.g0069.t1 | - |
Lsat_s090.g0070.t1 | BLR2807 PROTEIN |
Lsat_s090.g0071.t1 | - |
Lsat_s090.g0072.t1 | MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN |
Lsat_s090.g0073.t1 | CORNICHON-RELATED |
Lsat_s090.g0074.t1 | WD REPEAT PROTEIN 26-RELATED |
Lsat_s090.g0075.t1 | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE |
Lsat_s090.g0076.t1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
Lsat_s090.g0077.t1 | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1 |
Lsat_s090.g0078.t1 | IKB KINASE |
Lsat_s090.g0079.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
Lsat_s090.g0080.t1 | ELONGATION FACTOR G, MITOCHONDRIAL |