The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g15308 | REVERSE TRANSCRIPTASES |
| MBSQW58_g15309 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| MBSQW58_g1531 | |
| MBSQW58_g15310 | |
| MBSQW58_g15311 | MUCIN-22 |
| MBSQW58_g15312 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g15313 | |
| MBSQW58_g15314 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
| MBSQW58_g15315 | |
| MBSQW58_g15316 | |
| MBSQW58_g15317 | |
| MBSQW58_g15318 | SI:CH211-183D21.1 |
| MBSQW58_g15319 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g1532 | BILE ACID BETA-GLUCOSIDASE-RELATED |
| MBSQW58_g15320 | |
| MBSQW58_g15321 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g15322 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g15323 | RETROTRANSPOSON |
| MBSQW58_g15324 | NUMB |
| MBSQW58_g15325 | AP ENDONUCLEASE |
| MBSQW58_g15326 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g15327 | |
| MBSQW58_g15328 | SELENIDE, WATER DIKINASE |
| MBSQW58_g15329 | |
| MBSQW58_g1533 | PROTEIN SIDEKICK |
| MBSQW58_g15330 | DYNEIN 2 LIGHT INTERMEDIATE CHAIN, ISOFORM 2 |
| MBSQW58_g15331 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g15332 | |
| MBSQW58_g15333 | |
| MBSQW58_g15334 | |
| MBSQW58_g15335 | INHIBITOR OF GROWTH PROTEIN |
| MBSQW58_g15336 | CARBOHYDRATE SULFOTRANSFERASE |
| MBSQW58_g15337 | KIF1-BINDING PROTEIN |
| MBSQW58_g15338 | |
| MBSQW58_g15339 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g1534 | RNA BINDING MOTIF RBM PROTEIN -RELATED |
| MBSQW58_g15340 | |
| MBSQW58_g15341 | OS10G0105400 PROTEIN |
| MBSQW58_g15342 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL |
| MBSQW58_g15343 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| MBSQW58_g15344 | REVERSE TRANSCRIPTASE |
| MBSQW58_g15345 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g15346 | |
| MBSQW58_g15347 | |
| MBSQW58_g15348 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g15349 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| MBSQW58_g1535 | COILED-COIL DOMAIN-CONTAINING PROTEIN 15 |
| MBSQW58_g15350 | FTP DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g15351 | RAP GTPASE-ACTIVATING PROTEIN |
| MBSQW58_g15352 | ANKYRIN REPEAT FAMILY PROTEIN |
