About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)

Original Name

Lamellibrachia satsuma Miura, 1997

Key Reference Paper

1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)

Distribution

The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50 8,074/6,60040.2-27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s075.g0052.t1-
Lsat_s075.g0053.t1-
Lsat_s075.g0054.t1LP04239P
Lsat_s075.g0055.t1GLYCOSYLTRANSFERASE STELLO1-RELATED
Lsat_s075.g0056.t1-
Lsat_s075.g0057.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s075.g0058.t1-
Lsat_s075.g0059.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s075.g0060.t1BETA1,3-GALACTOSYLTRANSFERASE
Lsat_s075.g0061.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s075.g0062.t1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Lsat_s075.g0063.t1ATP-DEPENDENT RNA HELICASE
Lsat_s075.g0064.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s075.g0065.t1ATP-DEPENDENT RNA HELICASE
Lsat_s075.g0066.t1OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL
Lsat_s075.g0067.t1-
Lsat_s075.g0068.t1-
Lsat_s075.g0069.t1GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN
Lsat_s075.g0070.t1ALCOHOL DEHYDROGENASE 1-RELATED
Lsat_s075.g0071.t1-
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