Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00056510 | TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT |
| SKAU_T00056520 | RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1 |
| SKAU_T00056530 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| SKAU_T00056540 | NEURITIN-RELATED |
| SKAU_T00056550 | PHENYLALANYL-TRNA SYNTHETASE |
| SKAU_T00056560 | PROTEIN C6ORF149 |
| SKAU_T00056570 | RIBONUCLEASE P PROTEIN SUBUNIT P40 |
| SKAU_T00056580 | - |
| SKAU_T00056590 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00056600 | |
| SKAU_T00056610 | |
| SKAU_T00056620 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00056630 | |
| SKAU_T00056640 | |
| SKAU_T00056650 | |
| SKAU_T00056660 | |
| SKAU_T00056670 | |
| SKAU_T00056680 | |
| SKAU_T00056690 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| SKAU_T00056700 | SERINE/THREONINE-PROTEIN KINASE PIM |
| SKAU_T00056710 | |
| SKAU_T00056720 | HYPOTHETICAL PROTEIN LOC100359752 |
| SKAU_T00056730 | UNCHARACTERIZED |
| SKAU_T00056740 | ATP-DEPENDENT PROTEASE |
| SKAU_T00056750 | TUBULIN |
| SKAU_T00056760 | CELL DEATH ACTIVATOR CIDE |
| SKAU_T00056770 | - |
| SKAU_T00056780 | |
| SKAU_T00056790 | |
| SKAU_T00056800 | TGF-BETA FAMILY |
| SKAU_T00056810 | |
| SKAU_T00056820 | SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE |
| SKAU_T00056830 | CELL DIVISION PROTEIN KINASE |
| SKAU_T00056840 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00056850 | |
| SKAU_T00056860 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1 |
| SKAU_T00056870 | F-BOX ONLY PROTEIN 33 |
| SKAU_T00056880 | |
| SKAU_T00056890 | PROTEIN CBG26694 |
| SKAU_T00056900 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| SKAU_T00056910 | UPSTREAM BINDING TRANSCRIPTION FACTOR |
| SKAU_T00056920 | ANION EXCHANGE PROTEIN |
| SKAU_T00056930 | |
| SKAU_T00056940 | |
| SKAU_T00056950 | UBX DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00056960 | BAX INHIBITOR-RELATED |
| SKAU_T00056970 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00056980 | |
| SKAU_T00056990 | |
| SKAU_T00057000 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
