Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00053510 | LIPID PHOSPHATE PHOSPHATASE |
| SKAU_T00053520 | PARALEMMIN-RELATED |
| SKAU_T00053530 | MITOTIC INTERACTOR AND SUBSTRATE OF PLK1 MISP FAMILY MEMBER |
| SKAU_T00053540 | ZGC:174356 |
| SKAU_T00053550 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| SKAU_T00053560 | |
| SKAU_T00053570 | |
| SKAU_T00053580 | |
| SKAU_T00053590 | |
| SKAU_T00053600 | |
| SKAU_T00053610 | EPHRIN |
| SKAU_T00053620 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00053630 | TETRASPANIN |
| SKAU_T00053640 | |
| SKAU_T00053650 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| SKAU_T00053660 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| SKAU_T00053670 | ZINC/IRON TRANSPORTER |
| SKAU_T00053680 | LD24721P |
| SKAU_T00053690 | PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED |
| SKAU_T00053700 | NACHT DOMAIN- AND WD REPEAT-CONTAINING PROTEIN 1 |
| SKAU_T00053710 | TETRASPANIN |
| SKAU_T00053720 | HVA22-LIKE PROTEINS |
| SKAU_T00053730 | UPF0449 PROTEIN C19ORF25 |
| SKAU_T00053740 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
| SKAU_T00053750 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00053760 | |
| SKAU_T00053770 | |
| SKAU_T00053780 | |
| SKAU_T00053790 | |
| SKAU_T00053800 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00053810 | |
| SKAU_T00053820 | |
| SKAU_T00053830 | |
| SKAU_T00053840 | TUDOR DOMAIN CONTAINING PROTEIN |
| SKAU_T00053850 | BAND 7 PROTEIN-RELATED |
| SKAU_T00053860 | UNCHARACTERIZED |
| SKAU_T00053870 | NARDILYSIN |
| SKAU_T00053880 | LD44762P |
| SKAU_T00053890 | CHAPERONE ATP11 |
| SKAU_T00053900 | MATRIX PROTEIN, PUTATIVE-RELATED |
| SKAU_T00053910 | MATRIX PROTEIN, PUTATIVE-RELATED |
| SKAU_T00053920 | |
| SKAU_T00053930 | |
| SKAU_T00053940 | |
| SKAU_T00053950 | |
| SKAU_T00053960 | NUCLEAR FACTOR I |
| SKAU_T00053970 | |
| SKAU_T00053980 | |
| SKAU_T00053990 | |
| SKAU_T00054000 |
