About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g14994DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Chiridota_g14995REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g14996
Chiridota_g14997CHOLINE/ETHANOALAMINE KINASE
Chiridota_g14998
Chiridota_g14999NARDILYSIN
Chiridota_g15
Chiridota_g150
Chiridota_g1500CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
Chiridota_g15000
Chiridota_g15001
Chiridota_g15002SPERMATOGENESIS-ASSOCIATED PROTEIN 24
Chiridota_g15003DNA POLYMERASE
Chiridota_g15004
Chiridota_g15005
Chiridota_g15006FATTY ACID DESATURASE 2
Chiridota_g15007
Chiridota_g15008
Chiridota_g15009G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN
Chiridota_g1501UNCHARACTERIZED
Chiridota_g15010DIHYDROPTERIDINE REDUCTASE
Chiridota_g15011E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Chiridota_g15012
Chiridota_g15013ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Chiridota_g15014ATP-DEPENDENT RNA HELICASE
Chiridota_g15015
Chiridota_g15016BRCA2 AND CDKN1A INTERACTING PROTEIN
Chiridota_g15017UROPORPHYRINOGEN III SYNTHASE
Chiridota_g15018
Chiridota_g15019CASEIN KINASE-RELATED
Chiridota_g1502
Chiridota_g15020
Chiridota_g15021PROFILIN
Chiridota_g15022
Chiridota_g15023HEAVY PROTEIN, PUTATIVE-RELATED
Chiridota_g15024
Chiridota_g15025PROTEIN SERAC1
Chiridota_g15026PEPTIDASE S8
Chiridota_g15027
Chiridota_g15028
Chiridota_g15029
Chiridota_g1503
Chiridota_g15030
Chiridota_g15031PEPTIDASE S8
Chiridota_g15032
Chiridota_g15033
Chiridota_g15034CYTOCHROME P450 FAMILY 3
Chiridota_g15035
Chiridota_g15036
Chiridota_g15037
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