About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g14769
Chiridota_g1477
Chiridota_g14770CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g14771
Chiridota_g14772
Chiridota_g14773
Chiridota_g14774
Chiridota_g14775
Chiridota_g14776
Chiridota_g14777
Chiridota_g14778IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Chiridota_g14779
Chiridota_g1478NF-KAPPA-B ESSENTIAL MODULATOR
Chiridota_g14780UNCHARACTERIZED
Chiridota_g14781
Chiridota_g14782
Chiridota_g14783UNCHARACTERIZED
Chiridota_g14784
Chiridota_g14785T-BOX PROTEIN-RELATED
Chiridota_g14786
Chiridota_g14787
Chiridota_g14788STEROL DESATURASE
Chiridota_g14789
Chiridota_g1479
Chiridota_g14790-
Chiridota_g14791NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
Chiridota_g14792
Chiridota_g14793LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73
Chiridota_g14794LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73
Chiridota_g14795ZINC FINGER PROTEIN
Chiridota_g14796UNCHARACTERIZED
Chiridota_g14797CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
Chiridota_g14798ENDOSOME-ASSOCIATED TRAFFICKING REGULATOR 1
Chiridota_g14799
Chiridota_g148SARCOSPAN
Chiridota_g1480NF-KAPPA-B ESSENTIAL MODULATOR
Chiridota_g14800STEROL DESATURASE
Chiridota_g14801
Chiridota_g14802AGAP008648-PA
Chiridota_g14803
Chiridota_g14804
Chiridota_g14805
Chiridota_g14806CYTOCHROME C1
Chiridota_g14807UNCHARACTERIZED
Chiridota_g14808
Chiridota_g14809
Chiridota_g1481U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4
Chiridota_g14810
Chiridota_g14811
Chiridota_g14812E3 UBIQUITIN-PROTEIN LIGASE RNF8
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