About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf1353_0.2UNCHARACTERIZED
PE_Scaf1353_1.4ES1 PROTEIN HOMOLOG, MITOCHONDRIAL
PE_Scaf1353_1.5COILED-COIL DOMAIN-CONTAINING PROTEIN 189
PE_Scaf1353_2.0
PE_Scaf1353_3.0
PE_Scaf1353_4.5NUCLEAR HORMONE RECEPTOR HR3-RELATED
PE_Scaf1355_0.0
PE_Scaf1355_0.2
PE_Scaf1356_1.21NADH DEHYDROGENASE
PE_Scaf1356_1.3EXPRESSED PROTEIN
PE_Scaf1356_1.4NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf1357_0.1
PE_Scaf1357_0.2
PE_Scaf1358_0.0
PE_Scaf1359_0.0
PE_Scaf135_0.3
PE_Scaf1360_0.0
PE_Scaf1362_1.5PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC
PE_Scaf1362_1.6MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
PE_Scaf1362_2.10-
PE_Scaf1363_0.19
PE_Scaf1363_0.20SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
PE_Scaf1363_0.21
PE_Scaf1363_0.22POLYKETIDE SYNTHASE-RELATED
PE_Scaf1363_0.23UNCHARACTERIZED
PE_Scaf1364_0.0
PE_Scaf1365_0.0
PE_Scaf1367_0.2EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf136_0.1
PE_Scaf136_0.11
PE_Scaf136_0.12UNCHARACTERIZED
PE_Scaf136_0.13
PE_Scaf1370_0.4E3 UBIQUITIN-PROTEIN LIGASE KCMF1
PE_Scaf1370_0.5ENVOPLAKIN
PE_Scaf1371_0.3ACYL-COA SYNTHETASE
PE_Scaf1374_0.9
PE_Scaf1375_1.7MYOGENIC FACTOR
PE_Scaf1376_0.2
PE_Scaf1379_1.1
PE_Scaf1379_1.7GUANINE NUCLEOTIDE EXCHANGE FACTOR
PE_Scaf1379_1.8CUBILIN-LIKE PROTEIN
PE_Scaf1381_0.8AGAP011099-PA
PE_Scaf1381_0.9AGAP011099-PA
PE_Scaf1382_0.1NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf1382_0.16NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf1385_0.3ODD-SKIPPED - RELATED
PE_Scaf1385_1.5-
PE_Scaf1385_1.6
PE_Scaf1386_0.0HISTIDINE-RICH GLYCOPROTEIN
PE_Scaf1387_0.2PROTEIN EVA-1
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