Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)
Lamellibrachia satsuma Miura, 1997
1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)
The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50 | 8,074/6,600 | 40.2 | - | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s062.g0077.t1 | CYTOKINE RECEPTOR |
Lsat_s062.g0078.t1 | VASCULIN |
Lsat_s062.g0079.t1 | TRANSMEMBRANE PROTEIN 69 |
Lsat_s062.g0080.t1 | CYTOKINE RECEPTOR |
Lsat_s062.g0081.t1 | - |
Lsat_s062.g0082.t1 | PROTEIN SIDEKICK |
Lsat_s062.g0083.t1 | DRAB11-RELATED |
Lsat_s062.g0084.t1 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
Lsat_s062.g0085.t1 | JITTERBUG, ISOFORM N |
Lsat_s062.g0086.t1 | METALLOPROTEASE TLDD |
Lsat_s062.g0087.t1 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6 |
Lsat_s062.g0088.t1 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
Lsat_s062.g0089.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s062.g0090.t1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
Lsat_s062.g0091.t1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
Lsat_s062.g0092.t1 | GTP-BINDING PROTEIN-RELATED |
Lsat_s062.g0093.t1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Lsat_s062.g0094.t1 | UNCHARACTERIZED |
Lsat_s062.g0095.t1 | - |
Lsat_s062.g0096.t1 | TRANSMEMBRANE PROTEIN 246 |