The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g10448 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
| MBSQW58_g10449 | PX DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g1045 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| MBSQW58_g10450 | ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1 |
| MBSQW58_g10451 | |
| MBSQW58_g10452 | |
| MBSQW58_g10453 | |
| MBSQW58_g10454 | |
| MBSQW58_g10455 | UBIQUITIN-ACTIVATING ENZYME E1 |
| MBSQW58_g10456 | HISTONE H3 |
| MBSQW58_g10457 | PROBABLE MEMBRANE PROTEIN DUF221-RELATED |
| MBSQW58_g10458 | |
| MBSQW58_g10459 | PROBABLE MEMBRANE PROTEIN DUF221-RELATED |
| MBSQW58_g1046 | |
| MBSQW58_g10460 | UPF0764 PROTEIN C16ORF89 |
| MBSQW58_g10461 | |
| MBSQW58_g10462 | |
| MBSQW58_g10463 | |
| MBSQW58_g10464 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| MBSQW58_g10465 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| MBSQW58_g10466 | CADHERIN-87A |
| MBSQW58_g10467 | |
| MBSQW58_g10468 | |
| MBSQW58_g10469 | |
| MBSQW58_g1047 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| MBSQW58_g10470 | |
| MBSQW58_g10471 | NUCLEAR PORE COMPLEX PROTEIN NUP160 |
| MBSQW58_g10472 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
| MBSQW58_g10473 | FMRFAMIDE-RELATED PEPTIDES |
| MBSQW58_g10474 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| MBSQW58_g10475 | |
| MBSQW58_g10476 | |
| MBSQW58_g10477 | |
| MBSQW58_g10478 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g10479 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
| MBSQW58_g1048 | LIM DOMAIN KINASE 1 |
| MBSQW58_g10480 | AMMONIUM TRANSPORTER |
| MBSQW58_g10481 | |
| MBSQW58_g10482 | DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG |
| MBSQW58_g10483 | VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED |
| MBSQW58_g10484 | HIKESHI FAMILY MEMBER |
| MBSQW58_g10485 | RNA HELICASE |
| MBSQW58_g10486 | TYROSINE-PROTEIN KINASE |
| MBSQW58_g10487 | |
| MBSQW58_g10488 | FIDO DOMAIN-CONTAINING PROTEIN DDB_G0283145 |
| MBSQW58_g10489 | RAS-RELATED PROTEIN RAB |
| MBSQW58_g1049 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| MBSQW58_g10490 | - |
| MBSQW58_g10491 | DJ-1 PROTEIN |
| MBSQW58_g10492 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 |
