Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)
Lamellibrachia satsuma Miura, 1997
1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)
The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50 | 8,074/6,600 | 40.2 | - | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s058.g0013.t1 | TRANSLATION ELONGATION FACTOR-RELATED |
Lsat_s058.g0014.t1 | GOLGIN |
Lsat_s058.g0015.t1 | - |
Lsat_s058.g0016.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
Lsat_s058.g0017.t1 | INTERFERON REGULATORY FACTOR |
Lsat_s058.g0018.t1 | INTERFERON REGULATORY FACTOR |
Lsat_s058.g0019.t1 | - |
Lsat_s058.g0020.t1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Lsat_s058.g0021.t1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
Lsat_s058.g0022.t1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
Lsat_s058.g0023.t1 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
Lsat_s058.g0024.t1 | - |
Lsat_s058.g0025.t1 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
Lsat_s058.g0026.t1 | BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 |
Lsat_s058.g0027.t1 | ZINC FINGER PROTEIN 622 |
Lsat_s058.g0028.t1 | SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 |
Lsat_s058.g0029.t1 | LD33804P |
Lsat_s058.g0030.t1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
Lsat_s058.g0031.t1 | IA-2 PROTEIN TYROSINE PHOSPHATASE, ISOFORM C |
Lsat_s058.g0032.t1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |