About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 1035 1036 1037 1038 1039 1040 1041 1042 1043 1044 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_022371-T1-
OS493_022372-T1-
OS493_022373-T1-
OS493_022374-T1ZINC FINGER PROTEIN
OS493_022375-T1EXPORTIN 1/5
OS493_022376-T1-
OS493_022377-T1C1ORF73 PROTEIN
OS493_022378-T1C1ORF73 PROTEIN
OS493_022379-T1C1ORF73 PROTEIN
OS493_022380-T1LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN
OS493_022381-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_022382-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_022383-T1PEPTIDASE S9 PROLYL OLIGOPEPTIDASE
OS493_022384-T1TRANSCRIPTIONAL REPRESSOR MPRA
OS493_022385-T1UNCHARACTERIZED
OS493_022386-T1UNCHARACTERIZED
OS493_022387-T1UNCHARACTERIZED
OS493_022388-T1METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
OS493_022389-T1-
OS493_022390-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
TOP