About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12567_1.9SCAVENGER RECEPTOR CLASS F
PE_Scaf12569_1.0
PE_Scaf12569_3.5JITTERBUG, ISOFORM N
PE_Scaf12569_3.6ADP RIBOSYLATION FACTOR-RELATED
PE_Scaf12569_4.5PROTEIN CBG12054-RELATED
PE_Scaf1256_0.3EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf1256_2.3EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf1256_3.3EXPRESSED PROTEIN
PE_Scaf1256_4.0
PE_Scaf1256_4.1
PE_Scaf1256_4.2
PE_Scaf1256_4.8
PE_Scaf12571_0.2FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf12573_0.1
PE_Scaf12573_2.2PYRAZINAMIDASE/NICOTINAMIDASE
PE_Scaf12577_1.2LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf12577_1.3HEPARAN SULFATE SULFOTRANSFERASE
PE_Scaf12577_10.5MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN
PE_Scaf12577_10.6LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf12577_13.3
PE_Scaf12577_14.3
PE_Scaf12577_15.0
PE_Scaf12577_15.4
PE_Scaf12577_3.2LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf12577_6.2LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf12578_0.7G-PROTEIN COUPLED RECEPTOR 158-RELATED
PE_Scaf12578_0.9
PE_Scaf12581_0.0LORICRIN
PE_Scaf12581_0.1
PE_Scaf12581_0.17
PE_Scaf12581_0.18
PE_Scaf12581_0.2
PE_Scaf12581_0.20LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf12581_0.9
PE_Scaf12585_1.2
PE_Scaf12585_1.6APOPTOSIS-INDUCING FACTOR 1
PE_Scaf12585_1.7MYOSIN
PE_Scaf12585_1.8MEVALONATE KINASE
PE_Scaf12585_12.0CALCIUM-TRANSPORTING ATPASE
PE_Scaf12585_13.0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
PE_Scaf12585_13.5TRAF-TYPE ZINC FINGER PROTEIN-RELATED
PE_Scaf12585_13.6
PE_Scaf12585_15.8T-BOX PROTEIN-RELATED
PE_Scaf12585_5.2
PE_Scaf12585_5.5CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
PE_Scaf12585_8.3
PE_Scaf12585_9.0
PE_Scaf12588_0.2
PE_Scaf12588_0.6HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
PE_Scaf12588_0.8
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