Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig30_3GOGO:0000160;phosphorelay signal transduction system;contig30CDS11002917+0
contig30_3IPRSCANIPR001789Signal transduction response regulator, receiver domaincontig30CDS11002917+0
contig30_3PFAMPF00072Response regulator receiver domaincontig30CDS11002917+0
contig30_4EggNOGCOG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,2TR57@28211|Alphaproteobacteria,47F52@766|RickettsialesJcontig30CDS29143657-0
contig30_4KEGGK06173tRNA pseudouridine38-40 synthase [EC:5.4.99.12]contig30CDS29143657-0
contig30_4GOGO:0001522;GO:0003723;GO:0009451;GO:0009982;pseudouridine synthesis; RNA binding; RNA modification; pseudouridine synthase activity;contig30CDS29143657-0
contig30_4IPRSCANIPR020097Pseudouridine synthase I, TruA, alpha/beta domaincontig30CDS29143657-0
contig30_4PFAMPF01416tRNA pseudouridine synthasecontig30CDS29143657-0
contig30_5EggNOGCOG0012@1|root,COG0012@2|Bacteria,1TPRK@1239|Firmicutes,2482Z@186801|Clostridia,42FGS@68295|ThermoanaerobacteralesJcontig30CDS36714018-1
contig30_5KEGGK19788obg-like ATPase 1contig30CDS36714018-1
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