Symbiotic Microorganism Data

Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Proteobacteria bacterium	Chrysomallon squamiferum	495,607	47	-	31.15	75.27	2.197	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B4	-	PRJNA764822	-	MAG	1224	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig3_20	IPRSCAN	IPR006153	Cation/H+ exchanger	contig3	CDS	18597	19625	-	1
contig3_20	PFAM	PF00999	Sodium/hydrogen exchanger family	contig3	CDS	18597	19625	-	1
contig3_4	EggNOG	COG0792@1\|root,COG0792@2\|Bacteria,1N6VN@1224\|Proteobacteria,2UFTM@28211\|Alphaproteobacteria,2JU8R@204441\|Rhodospirillales	L	contig3	CDS	4289	4660	+	0
contig3_4	KEGG	K07460	putative endonuclease	contig3	CDS	4289	4660	+	0
contig3_4	IPRSCAN	IPR003509	UPF0102 protein YraN-like	contig3	CDS	4289	4660	+	0
contig3_4	PFAM	PF02021	Uncharacterised protein family UPF0102	contig3	CDS	4289	4660	+	0
contig3_5	EggNOG	COG0616@1\|root,arCOG01311@2157\|Archaea,2XTG8@28890\|Euryarchaeota,2N9DH@224756\|Methanomicrobia	O	contig3	CDS	4746	7112	-	0
contig3_5	KEGG	K04773	protease IV [EC:3.4.21.-]	contig3	CDS	4746	7112	-	0
contig3_5	GO	GO:0006508;GO:0008233;	proteolysis; peptidase activity;	contig3	CDS	4746	7112	-	0
contig3_5	IPRSCAN	IPR002142	Peptidase S49	contig3	CDS	4746	7112	-	0

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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