Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig3_19IPRSCANIPR024567Ribonuclease HII/HIII domaincontig3CDS1795818581-0
contig3_19PFAMPF01351Ribonuclease HIIcontig3CDS1795818581-0
contig3_2EggNOGCOG0752@1|root,COG0752@2|Bacteria,1MVCJ@1224|Proteobacteria,42MNQ@68525|delta/epsilon subdivisions,2WJJW@28221|Deltaproteobacteria,2MQ4G@213462|SyntrophobacteralesJcontig3CDS11181972-0
contig3_2KEGGK01878glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]contig3CDS11181972-0
contig3_2GOGO:0000166;GO:0004820;GO:0005524;GO:0005737;GO:0006426;nucleotide binding; glycine-tRNA ligase activity; ATP binding; cytoplasm; glycyl-tRNA aminoacylation;contig3CDS11181972-0
contig3_2IPRSCANIPR002310Glycine-tRNA ligase, alpha subunitcontig3CDS11181972-0
contig3_2PFAMPF02091Glycyl-tRNA synthetase alpha subunitcontig3CDS11181972-0
contig3_20EggNOGCOG0475@1|root,COG0475@2|Bacteria,1QTSD@1224|Proteobacteria,2TW8J@28211|Alphaproteobacteria,4BTG0@82117|unclassified AlphaproteobacteriaPcontig3CDS1859719625-1
contig3_20KEGGK26735K+:H+ antiportercontig3CDS1859719625-1
contig3_20GOGO:0006812;GO:0015297;GO:0016020;GO:0055085;GO:1902600;monoatomic cation transport; antiporter activity; membrane; transmembrane transport; proton transmembrane transport;contig3CDS1859719625-1
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