Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig23_9KEGGK237865'-3' exonuclease [EC:3.1.11.-]contig23CDS1012010971-0
contig23_9GOGO:0003677;DNA binding;contig23CDS1012010971-0
contig23_9IPRSCANIPR0200465'-3' exonuclease, alpha-helical arch, N-terminalcontig23CDS1012010971-0
contig23_9PFAMPF027395'-3' exonuclease, N-terminal resolvase-like domaincontig23CDS1012010971-0
contig24_1EggNOGCOG0172@1|root,COG0172@2|Bacteria,1TP4W@1239|Firmicutes,2485M@186801|Clostridia,42EYY@68295|ThermoanaerobacteralesJcontig24CDS3500+10
contig24_1KEGGK01875seryl-tRNA synthetase [EC:6.1.1.11]contig24CDS3500+10
contig24_1GOGO:0000166;GO:0004812;GO:0005524;GO:0006418;nucleotide binding; aminoacyl-tRNA ligase activity; ATP binding; tRNA aminoacylation for protein translation;contig24CDS3500+10
contig24_1IPRSCANIPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)contig24CDS3500+10
contig24_1PFAMPF00587tRNA synthetase class II core domain (G, H, P, S and T)contig24CDS3500+10
contig24_2EggNOGCOG0496@1|root,COG0496@2|Bacteria,1MVHE@1224|Proteobacteria,2TQXZ@28211|Alphaproteobacteria,47F7J@766|RickettsialesFcontig24CDS5541375+0
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