Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig22_2EggNOGCOG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,1MUFZ@1224|Proteobacteria,2TRGN@28211|Alphaproteobacteria,4B8A5@82115|RhizobiaceaeLcontig22CDS14151579+1
contig22_2KEGGK03168DNA topoisomerase I [EC:5.6.2.1]contig22CDS14151579+1
contig23_10EggNOGCOG0353@1|root,COG0353@2|Bacteria,1MV9Q@1224|Proteobacteria,2TRZM@28211|Alphaproteobacteria,47F94@766|RickettsialesLcontig23CDS1094911563-0
contig23_10KEGGK06187recombination protein RecRcontig23CDS1094911563-0
contig23_11EggNOGCOG0249@1|root,COG0249@2|Bacteria,1MUGX@1224|Proteobacteria,2TQRR@28211|Alphaproteobacteria,47EZJ@766|RickettsialesLcontig23CDS1157512891-1
contig23_11KEGGK03555DNA mismatch repair protein MutScontig23CDS1157512891-1
contig23_11GOGO:0005524;GO:0006298;GO:0030983;ATP binding; mismatch repair; mismatched DNA binding;contig23CDS1157512891-1
contig23_11IPRSCANIPR000432DNA mismatch repair protein MutS, C-terminalcontig23CDS1157512891-1
contig23_11PFAMPF00488MutS domain Vcontig23CDS1157512891-1
contig23_2EggNOGCOG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,1HYTA@117743|Flavobacteriia,405W3@61432|unclassified FlavobacteriaceaeScontig23CDS5971775+0
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