Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig15_1EggNOG2DBCX@1|root,2Z8G8@2|Bacteria,1MZ1E@1224|Proteobacteria,1RR8T@1236|GammaproteobacteriaScontig15CDS1534+10
contig15_1KEGGK04058type III secretion protein Wcontig15CDS1534+10
contig15_10EggNOGCOG1278@1|root,COG1278@2|Bacteria,1RAUE@1224|Proteobacteria,2U0S7@28211|Alphaproteobacteria,43YDB@69657|HyphomonadaceaeKcontig15CDS1788818391-0
contig15_10KEGGK03704cold shock proteincontig15CDS1788818391-0
contig15_10GOGO:0003676;nucleic acid binding;contig15CDS1788818391-0
contig15_10IPRSCANIPR002059Cold-shock protein, DNA-bindingcontig15CDS1788818391-0
contig15_10PFAMPF00313'Cold-shock' DNA-binding domaincontig15CDS1788818391-0
contig15_11EggNOGCOG1863@1|root,COG1863@2|Bacteria,1VEJ0@1239|Firmicutes,24REY@186801|Clostridia,36MMM@31979|ClostridiaceaePcontig15CDS1860119041+0
contig15_11KEGGK05569multicomponent Na+:H+ antiporter subunit Econtig15CDS1860119041+0
contig15_11GOGO:0006812;GO:0008324;GO:0016020;monoatomic cation transport; monoatomic cation transmembrane transporter activity; membrane;contig15CDS1860119041+0
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