Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig35_1EggNOGCOG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,2TQT0@28211|Alphaproteobacteria,4BPGC@82117|unclassified AlphaproteobacteriaVcontig35CDS32069-10
contig35_1KEGGK18989multidrug efflux pumpcontig35CDS32069-10
contig35_1GOGO:0016020;GO:0022857;GO:0055085;membrane; transmembrane transporter activity; transmembrane transport;contig35CDS32069-10
contig35_1IPRSCANIPR001036Acriflavin resistance proteincontig35CDS32069-10
contig35_1PFAMPF00873AcrB/AcrD/AcrF familycontig35CDS32069-10
contig35_2EggNOGCOG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,1HXW9@117743|Flavobacteriia,2PBTI@246874|CryomorphaceaeMcontig35CDS20833204-0
contig35_2KEGGK18990membrane fusion protein, multidrug efflux systemcontig35CDS20833204-0
contig35_3EggNOGCOG0042@1|root,COG0042@2|Bacteria,1MUY1@1224|Proteobacteria,1RN28@1236|Gammaproteobacteria,45ZR3@72273|ThiotrichalesJcontig35CDS33694295+0
contig35_3KEGGK05539tRNA-dihydrouridine synthase A [EC:1.-.-.-]contig35CDS33694295+0
contig35_3IPRSCANIPR035587DUS-like, FMN-binding domaincontig35CDS33694295+0
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