Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig34_53GOGO:0015031;protein transport;contig34CDS4466444921-0
contig34_53IPRSCANIPR021123Type III secretion, needle-protein-likecontig34CDS4466444921-0
contig34_53PFAMPF09392Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscFcontig34CDS4466444921-0
contig34_54KEGGK18984secretion system chaperone SsaEcontig34CDS4490545153-0
contig34_55EggNOGCOG1115@1|root,COG1115@2|Bacteria,1MUI3@1224|Proteobacteria,1RMNF@1236|Gammaproteobacteria,1XHC5@135619|OceanospirillalesEcontig34CDS4522846562-0
contig34_55KEGGK03310alanine or glycine:cation symporter, AGCS familycontig34CDS4522846562-0
contig34_55GOGO:0005283;GO:0006814;GO:0006865;GO:0016020;amino acid:sodium symporter activity; sodium ion transport; amino acid transport; membrane;contig34CDS4522846562-0
contig34_55IPRSCANIPR001463Sodium:alanine symportercontig34CDS4522846562-0
contig34_55PFAMPF01235Sodium:alanine symporter familycontig34CDS4522846562-0
contig34_56KEGGK11934outer membrane protein Xcontig34CDS4668548280-0
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