Symbiotic Microorganism Data

Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Proteobacteria bacterium	Chrysomallon squamiferum	495,607	47	-	31.15	75.27	2.197	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B4	-	PRJNA764822	-	MAG	1224	-

Gene Information

<< First 114 115 116 117 118 119 120 121 122 123 Forward> Last>> 154 pages in total

Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig34_49	KEGG	K01520	dUTP diphosphatase [EC:3.6.1.23]	contig34	CDS	41369	41812	+	0
contig34_49	IPRSCAN	IPR029054	dUTPase-like	contig34	CDS	41369	41812	+	0
contig34_49	PFAM	PF00692	dUTPase	contig34	CDS	41369	41812	+	0
contig34_5	KEGG	K13583	GcrA cell cycle regulator	contig34	CDS	3443	3736	+	0
contig34_50	EggNOG	COG0522@1\|root,COG0522@2\|Bacteria,1MW0U@1224\|Proteobacteria,2TRQH@28211\|Alphaproteobacteria,43HBH@69277\|Phyllobacteriaceae	J	contig34	CDS	41830	42429	-	0
contig34_50	KEGG	K02986	small subunit ribosomal protein S4	contig34	CDS	41830	42429	-	0
contig34_50	GO	GO:0003723;	RNA binding;	contig34	CDS	41830	42429	-	0
contig34_50	IPRSCAN	IPR002942	RNA-binding S4 domain	contig34	CDS	41830	42429	-	0
contig34_50	PFAM	PF01479	S4 domain	contig34	CDS	41830	42429	-	0
contig34_51	EggNOG	COG1253@1\|root,COG1253@2\|Bacteria,2GF7Z@200930\|Deferribacteres	S	contig34	CDS	43156	43944	-	0

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.