Detailed information of PRJNA764822.B4

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B4

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Proteobacteria bacteriumChrysomallon squamiferum495,607 47-31.1575.272.197-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B4-PRJNA764822-MAG1224-


Gene Information

<< First 113 114 115 116 117 118 119 120 121 122 Forward> Last>>        154 pages in total

GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig34_47KEGGK02968small subunit ribosomal protein S20contig34CDS4011040397-0
contig34_47GOGO:0003723;GO:0003735;GO:0005840;GO:0006412;RNA binding; structural constituent of ribosome; ribosome; translation;contig34CDS4011040397-0
contig34_47IPRSCANIPR002583Small ribosomal subunit protein bS20contig34CDS4011040397-0
contig34_47PFAMPF01649Ribosomal protein S20contig34CDS4011040397-0
contig34_48EggNOGCOG0266@1|root,COG0266@2|Bacteria,1MVM5@1224|Proteobacteria,2TS4C@28211|Alphaproteobacteria,4BQ29@82117|unclassified AlphaproteobacteriaLcontig34CDS4046941302-0
contig34_48KEGGK10563formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]contig34CDS4046941302-0
contig34_48GOGO:0003684;GO:0003906;GO:0006284;GO:0008270;GO:0016799;damaged DNA binding; DNA-(apurinic or apyrimidinic site) endonuclease activity; base-excision repair; zinc ion binding; hydrolase activity, hydrolyzing N-glycosyl compounds;contig34CDS4046941302-0
contig34_48IPRSCANIPR015886DNA glycosylase/AP lyase, H2TH DNA-bindingcontig34CDS4046941302-0
contig34_48PFAMPF06831Formamidopyrimidine-DNA glycosylase H2TH domaincontig34CDS4046941302-0
contig34_49EggNOGCOG0756@1|root,COG0756@2|Bacteria,1V6EC@1239|Firmicutes,25CJ6@186801|Clostridia,42JF2@68295|ThermoanaerobacteralesFcontig34CDS4136941812+0
TOP