Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig124_1GOGO:0005975;carbohydrate metabolic process;contig124CDS33323-10
contig124_1IPRSCANIPR001223Glycoside hydrolase family 18, catalytic domaincontig124CDS33323-10
contig124_1PFAMPF00704Glycosyl hydrolases family 18contig124CDS33323-10
contig124_2EggNOGCOG2304@1|root,COG2304@2|Bacteria,1MYB6@1224|Proteobacteria,1SKTM@1236|GammaproteobacteriaScontig124CDS35594866-0
contig124_2KEGGK02622topoisomerase IV subunit B [EC:5.6.2.2]contig124CDS35594866-0
contig125_1KEGGK18133major outer membrane protein P.IBcontig125CDS3716-10
contig125_10EggNOGCOG1576@1|root,COG1576@2|Bacteria,1R9Z2@1224|Proteobacteria,2VQ2M@28216|Betaproteobacteria,2KMNH@206350|NitrosomonadalesJcontig125CDS68367303+0
contig125_10KEGGK0078323S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]contig125CDS68367303+0
contig125_10GOGO:0006364;GO:0008168;rRNA processing; methyltransferase activity;contig125CDS68367303+0
contig125_10IPRSCANIPR003742RNA methyltransferase RlmHcontig125CDS68367303+0
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