Symbiotic Microorganism Data

Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacterium	Chrysomallon squamiferum	1,672,431	171	-	39.65	98.54	0.883	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B3	-	PRJNA764822	-	MAG	1913989	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig12_10	EggNOG	COG2891@1\|root,COG2891@2\|Bacteria	M	contig12	CDS	11914	12381	-	0
contig12_10	KEGG	K03571	rod shape-determining protein MreD	contig12	CDS	11914	12381	-	0
contig12_10	GO	GO:0008360;GO:0016020;	regulation of cell shape; membrane;	contig12	CDS	11914	12381	-	0
contig12_10	IPRSCAN	IPR007227	Cell shape-determining protein MreD	contig12	CDS	11914	12381	-	0
contig12_10	PFAM	PF04093	rod shape-determining protein MreD	contig12	CDS	11914	12381	-	0
contig12_11	EggNOG	COG1792@1\|root,COG1792@2\|Bacteria,1N8ZS@1224\|Proteobacteria,1RMK4@1236\|Gammaproteobacteria,1J88F@118884\|unclassified Gammaproteobacteria	M	contig12	CDS	12384	13175	-	0
contig12_11	KEGG	K03570	rod shape-determining protein MreC	contig12	CDS	12384	13175	-	0
contig12_11	GO	GO:0008360;	regulation of cell shape;	contig12	CDS	12384	13175	-	0
contig12_11	IPRSCAN	IPR007221	Rod shape-determining protein MreC	contig12	CDS	12384	13175	-	0
contig12_11	PFAM	PF04085	rod shape-determining protein MreC	contig12	CDS	12384	13175	-	0

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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