Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig100_3GOGO:0015627;GO:0015628;type II protein secretion system complex; protein secretion by the type II secretion system;contig100CDS8461232+0
contig100_3IPRSCANIPR003413Type II secretion system protein GspI, C-terminalcontig100CDS8461232+0
contig100_3PFAMPF02501Type II secretion system (T2SS), protein Icontig100CDS8461232+0
contig100_4EggNOGCOG4795@1|root,COG4795@2|Bacteria,1N942@1224|Proteobacteria,1SED4@1236|GammaproteobacteriaUcontig100CDS12291729+0
contig100_4KEGGK02459general secretion pathway protein Jcontig100CDS12291729+0
contig100_4IPRSCANIPR012902Prokaryotic N-terminal methylation sitecontig100CDS12291729+0
contig100_4PFAMPF07963Prokaryotic N-terminal methylation motifcontig100CDS12291729+0
contig100_5EggNOGCOG3156@1|root,COG3156@2|Bacteria,1RAQM@1224|Proteobacteria,1S2N8@1236|Gammaproteobacteria,460PF@72273|ThiotrichalesUcontig100CDS17302182+1
contig100_5KEGGK02460general secretion pathway protein Kcontig100CDS17302182+1
contig101_1EggNOG2DBEF@1|root,2Z8SA@2|Bacteria,1RDDA@1224|Proteobacteria,42RC0@68525|delta/epsilon subdivisions,2YP04@29547|EpsilonproteobacteriaScontig101CDS1126+10
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