Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig116_1EggNOGCOG2856@1|root,COG2856@2|BacteriaEcontig116CDS201129-0
contig116_1KEGGK21686XRE family transcriptional regulator, fatty acid utilization regulatorcontig116CDS201129-0
contig116_1IPRSCANIPR010359IrrE N-terminal-like domaincontig116CDS201129-0
contig116_1PFAMPF06114IrrE N-terminal-like domaincontig116CDS201129-0
contig116_2EggNOGCOG0550@1|root,COG1754@1|root,COG0550@2|Bacteria,COG1754@2|Bacteria,1MUFZ@1224|Proteobacteria,1RNZ2@1236|Gammaproteobacteria,1J526@118884|unclassified GammaproteobacteriaLcontig116CDS12153563-0
contig116_2KEGGK03168DNA topoisomerase I [EC:5.6.2.1]contig116CDS12153563-0
contig116_2GOGO:0003677;GO:0003916;GO:0006265;DNA binding; DNA topoisomerase activity; DNA topological change;contig116CDS12153563-0
contig116_2IPRSCANIPR013497DNA topoisomerase, type IA, centralcontig116CDS12153563-0
contig116_2PFAMPF01131DNA topoisomerasecontig116CDS12153563-0
contig116_3EggNOGCOG2922@1|root,COG2922@2|Bacteria,1RD5F@1224|Proteobacteria,1S43X@1236|GammaproteobacteriaScontig116CDS35634054-0
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