Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig9_2IPRSCANIPR011113Rho termination factor, RNA-binding domaincontig9CDS4921778-0
contig9_2PFAMPF07497Rho termination factor, RNA-binding domaincontig9CDS4921778-0
contig9_20EggNOGCOG1758@1|root,COG1758@2|Bacteria,1N6TX@1224|Proteobacteria,1SCSR@1236|Gammaproteobacteria,1J6XN@118884|unclassified GammaproteobacteriaKcontig9CDS2005720389-0
contig9_20KEGGK03060DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]contig9CDS2005720389-0
contig9_20GOGO:0003677;GO:0003899;GO:0006351;DNA binding; DNA-directed 5'-3' RNA polymerase activity; DNA-templated transcription;contig9CDS2005720389-0
contig9_20IPRSCANIPR006110RNA polymerase, subunit omega/Rpo6/RPB6contig9CDS2005720389-0
contig9_20PFAMPF01192RNA polymerase Rpb6contig9CDS2005720389-0
contig9_21EggNOGCOG0847@1|root,COG0847@2|Bacteria,1MV8Z@1224|Proteobacteria,1RNHQ@1236|Gammaproteobacteria,1J4T2@118884|unclassified GammaproteobacteriaLcontig9CDS2046021131+0
contig9_21KEGGK14159ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]contig9CDS2046021131+0
contig9_21IPRSCANIPR013520Exonuclease, RNase T/DNA polymerase IIIcontig9CDS2046021131+0
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