Symbiotic Microorganism Data

Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics

Species	Host	Genome Size	Contig Count	Protein Count	GC Percentage	CheckM Completeness	CheckM Contamination	CheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacterium	Chrysomallon squamiferum	1,672,431	171	-	39.65	98.54	0.883	-

NCBI Metadata

Assembly Level	Assembly ID	GenBank ID	Bioproject	Biosample	Genome Category	NCBI Taxon ID	Isolation Source
Contig	PRJNA764822.B3	-	PRJNA764822	-	MAG	1913989	-

Gene Information

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Gene	Database	Annotation ID	Description	Contigs	Type	Start	end	Strand	Partial
contig89_3	IPRSCAN	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	contig89	CDS	823	1341	-	0
contig89_3	PFAM	PF01510	N-acetylmuramoyl-L-alanine amidase	contig89	CDS	823	1341	-	0
contig89_4	EggNOG	COG2175@1\|root,COG2175@2\|Bacteria,1R5KS@1224\|Proteobacteria,1RZQ2@1236\|Gammaproteobacteria	Q	contig89	CDS	1359	2222	-	0
contig89_4	KEGG	K25061	uridine-5'-phosphate dioxygenase [EC:1.14.11.49]	contig89	CDS	1359	2222	-	0
contig89_4	GO	GO:0016491;	oxidoreductase activity;	contig89	CDS	1359	2222	-	0
contig89_4	IPRSCAN	IPR003819	TauD/TfdA-like domain	contig89	CDS	1359	2222	-	0
contig89_4	PFAM	PF02668	Taurine catabolism dioxygenase TauD, TfdA family	contig89	CDS	1359	2222	-	0
contig89_5	EggNOG	COG0706@1\|root,COG0706@2\|Bacteria,1MV5M@1224\|Proteobacteria,1RMH1@1236\|Gammaproteobacteria	U	contig89	CDS	2215	3831	-	0
contig89_5	KEGG	K03217	YidC/Oxa1 family membrane protein insertase	contig89	CDS	2215	3831	-	0
contig89_5	IPRSCAN	IPR028053	Membrane insertase YidC, N-terminal	contig89	CDS	2215	3831	-	0

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Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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