Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig70_1PFAMPF01040UbiA prenyltransferase familycontig70CDS3536-10
contig70_2EggNOGCOG0564@1|root,COG0564@2|Bacteria,1MVDX@1224|Proteobacteria,1RPAN@1236|Gammaproteobacteria,1J54Z@118884|unclassified GammaproteobacteriaJcontig70CDS5331438-0
contig70_2KEGGK0617923S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]contig70CDS5331438-0
contig70_2GOGO:0001522;GO:0003723;GO:0009451;GO:0009982;pseudouridine synthesis; RNA binding; RNA modification; pseudouridine synthase activity;contig70CDS5331438-0
contig70_2IPRSCANIPR006145Pseudouridine synthase, RsuA/RluA-likecontig70CDS5331438-0
contig70_2PFAMPF00849RNA pseudouridylate synthasecontig70CDS5331438-0
contig70_3EggNOGCOG0084@1|root,COG0084@2|Bacteria,1MUC0@1224|Proteobacteria,1RP6E@1236|Gammaproteobacteria,1J4XC@118884|unclassified GammaproteobacteriaLcontig70CDS14382205-0
contig70_3KEGGK03424TatD DNase family protein [EC:3.1.21.-]contig70CDS14382205-0
contig70_3GOGO:0016788;hydrolase activity, acting on ester bonds;contig70CDS14382205-0
contig70_3IPRSCANIPR0011303'-5' ssDNA/RNA exonuclease TatD-likecontig70CDS14382205-0
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