Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig63_5IPRSCANIPR005119LysR, substrate-bindingcontig63CDS71928079-0
contig63_5PFAMPF03466LysR substrate binding domaincontig63CDS71928079-0
contig63_6EggNOGCOG0620@1|root,COG0620@2|Bacteria,1MUI9@1224|Proteobacteria,1RMBA@1236|Gammaproteobacteria,1J4C4@118884|unclassified GammaproteobacteriaEcontig63CDS817310449+1
contig63_6KEGGK005495-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]contig63CDS817310449+1
contig63_6GOGO:0003871;GO:0008270;GO:0009086;5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity; zinc ion binding; methionine biosynthetic process;contig63CDS817310449+1
contig63_6IPRSCANIPR002629Cobalamin-independent methionine synthase MetE, C-terminal/archaealcontig63CDS817310449+1
contig63_6PFAMPF01717Cobalamin-independent synthase, Catalytic domaincontig63CDS817310449+1
contig64_1EggNOGCOG0858@1|root,COG0858@2|Bacteria,1MZPE@1224|Proteobacteria,1S9AF@1236|Gammaproteobacteria,1JA03@118884|unclassified GammaproteobacteriaJcontig64CDS408683-0
contig64_1KEGGK02834ribosome-binding factor Acontig64CDS408683-0
contig64_1GOGO:0006364;rRNA processing;contig64CDS408683-0
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