Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig57_29KEGGK02621topoisomerase IV subunit A [EC:5.6.2.2]contig57CDS2252424761+0
contig57_29GOGO:0003677;GO:0003918;GO:0005524;GO:0006265;DNA binding; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; ATP binding; DNA topological change;contig57CDS2252424761+0
contig57_29IPRSCANIPR002205DNA topoisomerase, type IIA, domain Acontig57CDS2252424761+0
contig57_29PFAMPF00521DNA gyrase/topoisomerase IV, subunit Acontig57CDS2252424761+0
contig57_30EggNOGCOG0768@1|root,COG0768@2|Bacteria,1R09T@1224|Proteobacteria,2UIHR@28211|Alphaproteobacteria,4BS36@82117|unclassified AlphaproteobacteriaMcontig57CDS2492325684+1
contig57_30KEGGK13735adhesin/invasincontig57CDS2492325684+1
contig57_30IPRSCANIPR024519Inverse autotransporter, beta-domaincontig57CDS2492325684+1
contig57_30PFAMPF11924Inverse autotransporter, beta-domaincontig57CDS2492325684+1
contig57_4EggNOGCOG4938@1|root,COG4938@2|Bacteria,1NEEG@1224|Proteobacteria,1RZMD@1236|Gammaproteobacteria,1XM70@135619|OceanospirillalesScontig57CDS468764-0
contig57_4KEGGK07459putative ATP-dependent endonuclease of the OLD familycontig57CDS468764-0
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