Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig56_2IPRSCANIPR020097Pseudouridine synthase I, TruA, alpha/beta domaincontig56CDS22042410-1
contig56_2PFAMPF01416tRNA pseudouridine synthasecontig56CDS22042410-1
contig57_1EggNOG2CCJN@1|root,2ZDBW@2|Bacteria,1P71S@1224|Proteobacteria,1ST98@1236|Gammaproteobacteria-contig57CDS2151-10
contig57_10EggNOGCOG2877@1|root,COG2877@2|Bacteria,1MV91@1224|Proteobacteria,1RMGQ@1236|Gammaproteobacteria,1J4QY@118884|unclassified GammaproteobacteriaMcontig57CDS75648400+0
contig57_10KEGGK016272-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]contig57CDS75648400+0
contig57_10GOGO:0009058;biosynthetic process;contig57CDS75648400+0
contig57_10IPRSCANIPR006218DAHP synthetase I/KDSAcontig57CDS75648400+0
contig57_10PFAMPF00793DAHP synthetase I familycontig57CDS75648400+0
contig57_11EggNOGCOG1793@1|root,COG1793@2|Bacteria,1MUW3@1224|Proteobacteria,1S2JP@1236|Gammaproteobacteria,460RX@72273|ThiotrichalesLcontig57CDS84869310+0
contig57_11KEGGK26441DNA ligase [EC:6.5.1.1]contig57CDS84869310+0
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