Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig55_6PFAMPF01066CDP-alcohol phosphatidyltransferasecontig55CDS47575341+0
contig55_7KEGGK05230defensin, alphacontig55CDS56806423-0
contig56_1EggNOGCOG0471@1|root,COG0471@2|Bacteria,1MU0K@1224|Proteobacteria,1RMI1@1236|Gammaproteobacteria,1J8SM@118884|unclassified GammaproteobacteriaPcontig56CDS2492207+0
contig56_1KEGGK14445solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5contig56CDS2492207+0
contig56_1GOGO:0016020;GO:0055085;membrane; transmembrane transport;contig56CDS2492207+0
contig56_1IPRSCANIPR004680Citrate transporter-like domaincontig56CDS2492207+0
contig56_1PFAMPF03600Citrate transportercontig56CDS2492207+0
contig56_2EggNOGCOG0101@1|root,COG0101@2|Bacteria,1MUYI@1224|Proteobacteria,1RMK2@1236|Gammaproteobacteria,1J4NT@118884|unclassified GammaproteobacteriaJcontig56CDS22042410-1
contig56_2KEGGK06173tRNA pseudouridine38-40 synthase [EC:5.4.99.12]contig56CDS22042410-1
contig56_2GOGO:0001522;GO:0003723;GO:0009451;GO:0009982;pseudouridine synthesis; RNA binding; RNA modification; pseudouridine synthase activity;contig56CDS22042410-1
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