Detailed information of PRJNA764822.B3

>>Metagenome>>Host>>Symbiont>>PRJNA764822.B3

Genome Characteristics
SpeciesHostGenome SizeContig CountProtein CountGC PercentageCheckM CompletenessCheckM ContaminationCheckM Strain Heterogeneity
uncultured Gammaproteobacteria bacteriumChrysomallon squamiferum1,672,431 171-39.6598.540.883-

NCBI Metadata
Assembly LevelAssembly IDGenBank IDBioprojectBiosampleGenome CategoryNCBI Taxon IDIsolation Source
ContigPRJNA764822.B3-PRJNA764822-MAG1913989-


Gene Information

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GeneDatabaseAnnotation IDDescriptionContigsTypeStartendStrandPartial
contig50_4GOGO:0003677;GO:0006355;DNA binding; regulation of DNA-templated transcription;contig50CDS17172013+0
contig50_4IPRSCANIPR012318Crp-type HTH domaincontig50CDS17172013+0
contig50_4PFAMPF13545Crp-like helix-turn-helix domaincontig50CDS17172013+0
contig50_5EggNOGCOG2132@1|root,COG2132@2|Bacteria,1MV74@1224|Proteobacteria,2VZRG@28216|Betaproteobacteria,374KJ@32003|NitrosomonadalesQcontig50CDS21493270+0
contig50_5KEGGK00368nitrite reductase (NO-forming) [EC:1.7.2.1]contig50CDS21493270+0
contig50_5IPRSCANIPR001117Multicopper oxidase, second cupredoxin domaincontig50CDS21493270+0
contig50_5PFAMPF00394Multicopper oxidasecontig50CDS21493270+0
contig50_7EggNOGCOG1999@1|root,COG1999@2|Bacteria,1RHJ8@1224|Proteobacteria,1S3NG@1236|Gammaproteobacteria,2QBFP@267890|ShewanellaceaeScontig50CDS41285108+0
contig50_7KEGGK07152protein SCO1contig50CDS41285108+0
contig50_7IPRSCANIPR003782Copper chaperone SCO1/SenCcontig50CDS41285108+0
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